dpasfa预处理头动矫正后出现问题

Submitted by stern on Mon, 07/31/2017 - 04:37

严老师您好，我最近在尝试着用dpasfa进行数据分析，但是每次头动矫正后进行bet的时候就会报错，提示文件转换格式有问题，但是我都是事先转换好格式的，理论上不应该出现问题的呀，所以我考虑可能头动定位的时候出了问题，我今天多次调整，前联合定位后还是不行，接着我考虑可能是被试数据有问题，我一个一个检查头文件信息，我发现大小和dpasfa里面自带mask大小一样的，随后我尝试重装系统仍然不行，希望严老师可以百忙之中抽空答疑解惑，谢谢您了！

报错如下：
Apply Reorient Mats to functional images for Nor002: OK
Bet begin...
Chris Rorden's dcm2nii :: 1 April 2010 
reading preferences file D:\fMRI\winsoftware\tool\FuncTools\DPABI_V2.3_170105\DPABI_V2.3_170105\DPARSF\dcm2nii\dcm2nii.ini 
0 D:\fMRI\winsoftware\tool\FuncTools\DPABI_V2.3_170105\DPABI_V2.3_170105\DPARSF\dcm2nii\dcm2nii.exe ERROR: unable to find nonkidney\data_1\RealignParameter\Nor002 D:\ZY_data\CLBP_ nonkidney\data_1\RealignParameter\Nor002\Bet_meana20160203_132726ep2dboldTR2200GRAPPAs003a001_011BeforeBet.img 
Either drag and drop or specify command line options: 
  dcm2nii <options> <sourcenames> 
OPTIONS: 
-a Anonymize [remove identifying information]: Y,N = Y 
-b load settings from specified inifile, e.g. '-b C:\set\t1.ini'   
-c Collapse input folders: Y,N = N 
-d Date in filename [filename.dcm -> 20061230122032.nii]: Y,N = Y 
-e events (series/acq) in filename [filename.dcm -> s002a003.nii]: Y,N = Y 
-f Source filename [e.g. filename.par -> filename.nii]: Y,N = N 
-g gzip output, filename.nii.gz [ignored if '-n n']: Y,N = N 
-i ID  in filename [filename.dcm -> johndoe.nii]: Y,N = Y 
-n output .nii file [if no, create .hdr/.img pair]: Y,N = N 
-o Output Directory, e.g. 'C:\TEMP' (if unspecified, source directory is used) 
-p Protocol in filename [filename.dcm -> TFE_T1.nii]: Y,N = Y 
-r Reorient image to nearest orthogonal: Y,N  
-s SPM2/Analyze not SPM5/NIfTI [ignored if '-n y']: Y,N = Y 
-v Convert every image in the directory: Y,N = N 
-x Reorient and crop 3D NIfTI images: Y,N = N 
  You can also set defaults by editing D:\fMRI\winsoftware\tool\FuncTools\DPABI_V2.3_170105\DPABI_V2.3_170105\DPARSF\dcm2nii\dcm2nii.ini 
EXAMPLE: dcm2nii -a y -o C:\TEMP C:\DICOM\input1.par C:\input2.par 
Hit >> 
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Forums:

YAN Chao-Gan

Mon, 08/14/2017 - 01:25

CLBP_ nonkidney

中间有个空格

puyunfashi

Tue, 05/08/2018 - 03:11

您看一下是不是硬盘空间不足？

doctorsol

Mon, 10/01/2018 - 11:46

Chris Rorden's dcm2nii :: 2MAY2016 64bit BSD License :: (upgrade to dcm2niix suggested)
reading preferences file D:\Matlab\doctorsol\dpabi_v3.1_180801\dparsf\dcm2nii\dcm2nii.ini
0 D:\Matlab\doctorsol\dpabi_v3.1_180801\dparsf\dcm2nii\dcm2nii.exe ERROR: unable to find H:\12CN_DATA\09CN\T1ImgBet\CN015\Bet_co20061202_163030MVMVMVG20061202APUMVpMVIUUIUXUZHENHUAs007a1000BeforeBet.img
Either drag and drop or specify command line options:
dcm2nii <options> <sourcenames>
OPTIONS:
-4 Create 4D volumes, else DTI/fMRI saved as many 3D volumes: Y,N = N
-3 Create planar RGB images: Y,N = N
-a Anonymize [remove identifying information]: Y,N = Y
-b Load settings from specified inifile, e.g. '-b C:\set\t1.ini'
-c Collapse input folders: Y,N = N
-d Date in filename [filename.dcm -> 20061230122032.nii]: Y,N = Y
-e Events (series/acq) in filename [filename.dcm -> s002a003.nii]: Y,N = Y
-f Source filename [e.g. filename.par -> filename.nii]: Y,N = N
-g Gzip output, filename.nii.gz [ignored if '-n n']: Y,N = N
-i ID in filename [filename.dcm -> johndoe.nii]: Y,N = Y
-k sKip initial n volumes in fMRI, e.g. '-k 2': = 0
-l pLanar RGB (Y=old Analyze; N=new VTK NIfTI): Y,N = N
-m Manually prompt user to specify output format [NIfTI input only]: Y,N = N
-n Output .nii file [if no, create .hdr/.img pair]: Y,N = N
-o Output Directory, e.g. 'C:\TEMP' (if unspecified, source directory is used)
-p Protocol in filename [filename.dcm -> TFE_T1.nii]: Y,N = Y
-r Reorient image to nearest orthogonal: Y,N
-s SPM2/Analyze not SPM5/NIfTI [ignored if '-n y']: Y,N = Y
-t Text report (patient and scan details): Y,N = N
-v Convert every image in the directory: Y,N = N
-x Reorient and crop 3D NIfTI images: Y,N = N
You can also set defaults by editing D:\Matlab\doctorsol\dpabi_v3.1_180801\dparsf\dcm2nii\dcm2nii.ini
EXAMPLE: dcm2nii -a y -o C:\TEMP C:\DICOM\input1.par C:\input2.par
Hit <Enter> to exit.

>>同样的问题，不知道什么原因呢